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JNB_19453 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_19453" - Putative RNA polymerase ECF-subfamily sigma factor in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_19453Putative RNA polymerase ECF-subfamily sigma factor (414 aa)    
Predicted Functional Partners:
JNB_19448
Uncharacterized protein (117 aa)
 
          0.977
JNB_15648
Uncharacterized protein (120 aa)
 
          0.865
JNB_14338
Uncharacterized protein (118 aa)
 
          0.864
JNB_20038
Uncharacterized protein (117 aa)
 
          0.863
JNB_15643
Uncharacterized protein (121 aa)
   
          0.695
JNB_19443
GCN5-related N-acetyltransferase (191 aa)
              0.595
JNB_01460
Uncharacterized protein (139 aa)
 
          0.483
JNB_12274
Uncharacterized protein (140 aa)
              0.420
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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