STRINGSTRING
JNB_20268 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_20268" - Putative LysR-family transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_20268Putative LysR-family transcriptional regulator (303 aa)    
Predicted Functional Partners:
JNB_11614
Putative transcriptional regulator (298 aa)
   
          0.667
JNB_20263
Carboxylesterase (285 aa)
   
        0.659
JNB_20258
Uncharacterized protein (269 aa)
              0.648
JNB_11074
LysR (298 aa)
   
        0.562
JNB_03125
Putative transporter (330 aa)
     
      0.495
JNB_11979
Putative transcriptional regulator (291 aa)
     
   
  0.483
JNB_05714
Putative transcriptional regulator (148 aa)
     
   
  0.483
JNB_13278
L-lysine exporter family protein (204 aa)
         
  0.452
JNB_03815
Putative glutamate synthase (NADPH) large subunit (1514 aa)
         
  0.440
JNB_20248
Zinc-binding oxidoreductase (334 aa)
              0.439
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (15%) [HD]