STRINGSTRING
JNB_20303 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_20303" - Transcriptional regulatory protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_20303Transcriptional regulatory protein (227 aa)    
Predicted Functional Partners:
JNB_20298
Putative two-component sensor kinase (559 aa)
  0.997
JNB_15133
Putative two component system histidine kinase (576 aa)
  0.981
JNB_20293
Putative sodium-dicarboxylate symporter (452 aa)
 
          0.819
JNB_15138
Putative secreted protein (338 aa)
 
          0.691
JNB_15148
Putative integral membrane protein (531 aa)
 
          0.586
JNB_04405
Putative two-component sensor (351 aa)
   
   
  0.412
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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