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JNB_20528 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_20528" - Short-chain dehydrogenase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_20528Short-chain dehydrogenase (280 aa)    
Predicted Functional Partners:
JNB_20533
Uncharacterized protein (386 aa)
              0.859
JNB_04380
3-oxoacyl-[acyl-carrier protein] reductase (242 aa)
   
          0.765
JNB_10574
Short chain dehydrogenase (308 aa)
   
          0.726
JNB_12798
Hypothetical short chain dehydrogenase (217 aa)
   
          0.698
JNB_15538
Short chain dehydrogenase (256 aa)
   
          0.599
JNB_20538
Putative transcriptional regulator (338 aa)
              0.590
JNB_02345
3-ketoacyl-(Acyl-carrier-protein) reductase (445 aa)
   
          0.536
JNB_20553
Metallophosphoesterase (378 aa)
              0.487
JNB_20548
Uncharacterized protein (161 aa)
              0.487
JNB_20543
Probable dna-3-methyladenine glycosylase i protein (199 aa)
              0.487
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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