STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38707.1Hypothetical protein; FOG: TPR repeat. (261 aa)    
Predicted Functional Partners:
EAQ39080.2
Hypothetical protein.
  
    0.794
EAQ39184.1
Hypothetical protein.
  
     0.740
EAQ37901.3
Hypothetical protein.
  
     0.736
EAQ39338.1
Outer membrane protein.
  
  
 0.735
ribH
Riboflavin synthase beta-chain.
  
    0.733
EAQ39122.1
Parvulin-like peptidyl-prolyl isomerase.
  
    0.727
EAQ38717.1
Hypothetical protein.
  
     0.708
EAQ39449.1
Hypothetical protein.
  
     0.682
ftsQ
Cell division protein FtsQ.
  
   
 0.682
EAQ38692.3
Outer membrane protein/protective antigen OMA87.
  
    0.680
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.