STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38180.1Rhs family protein. (1081 aa)    
Predicted Functional Partners:
EAQ38182.1
Rhs family protein.
 
  
 
0.979
EAQ38179.1
PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.
 
    0.949
EAQ38178.1
Hypothetical protein; Transcriptional regulator, effector-binding domain/component.
 
     0.941
EAQ37958.1
Rhs family protein.
  
  
 
0.920
susD7
Outer membrane protein.
 
 
   0.890
susC41
TonB dependent/ligand-gated channel; Outer membrane receptor proteins, mostly Fe transport.
 
     0.847
EAQ38181.2
Hypothetical protein; FOG: PKD repeat.
 
    
0.802
EAQ38177.1
Uncharacterized low-complexity proteins.
  
    0.771
EAQ38366.1
PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.
 
    0.750
EAQ38852.1
Membrane-associated phospholipid phosphatase.
 
    0.731
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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