STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ37933.1Glycosyltransferase. (359 aa)    
Predicted Functional Partners:
EAQ37931.1
Sua5/YciO/YrdC/YwlC family protein; Putative translation factor (SUA5).
 
     0.804
EAQ37932.1
Hypothetical protein.
       0.773
EAQ37934.3
Hypothetical protein.
  
    0.589
EAQ37930.1
tRNA nucleotidyltransferase/poly(A) polymerase.
  
  
 0.555
EAQ38968.1
Isoamylase-like protein; 1,4-alpha-glucan branching enzyme.
   
 0.498
glgB
1,4-alpha-glucan branching enzyme.
   
 0.498
manC
Mannose-1-phosphate guanylyltransferase.
 
  
 0.456
EAQ40484.1
Uncharacterized protein conserved in bacteria.
  
     0.418
EAQ37935.1
DEAD/DEAH box helicase; Superfamily II DNA and RNA helicases.
   
   0.402
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.