STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFU68092.1Lipoprotein releasing ABC-type transporter permease LolE/LolC. (398 aa)    
Predicted Functional Partners:
AFU67682.1
Lipoprotein release ABC transporter, permease protein LolE.
  
  
 
0.929
lolD
Multidrug or lipoprotein exporter ABC-type transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
 0.918
rbfA
Ribosome-binding factor A RbfA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
 
     0.850
AFU68542.1
Outer membrane protein assembly complex protein, OM_YaeT family.
 
   
 0.778
AFU70074.1
Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.687
AFU68413.1
Outer membrane lipoprotein.
  
 
   0.683
AFU67677.1
Peptidoglycan-binding lipoprotein ion transport porin, OmpA family.
  
 
   0.649
AFU69116.1
Membrane-bound lytic murein transglycosylase MltD-like protein.
 
    0.610
AFU70214.1
Outer membrane lipoprotein-sorting protein LolA.
 
 
 
 0.610
AFU68094.1
methylmalonyl-CoA epimerase.
       0.588
Your Current Organism:
Psychroflexus torquis
NCBI taxonomy Id: 313595
Other names: P. torquis ATCC 700755, Psychroflexus torquis ACAM 623, Psychroflexus torquis ATCC 700755, Psychroflexus torquis str. ATCC 700755, Psychroflexus torquis strain ATCC 700755
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.