Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR15967.1 | EAR15968.1 | RB2501_03695 | RB2501_03700 | Hypothetical protein. | Hypothetical protein. | 0.999 |
EAR15967.1 | EAR15969.1 | RB2501_03695 | RB2501_03705 | Hypothetical protein. | Hypothetical protein. | 0.999 |
EAR15967.1 | EAR15970.1 | RB2501_03695 | RB2501_03710 | Hypothetical protein. | Molybdopterin oxidoredutase membrane subunit. | 0.999 |
EAR15967.1 | EAR15971.1 | RB2501_03695 | RB2501_03715 | Hypothetical protein. | Molybdopterin oxidoreductase, iron-sulfur binding subunit. | 0.999 |
EAR15967.1 | EAR15972.1 | RB2501_03695 | RB2501_03720 | Hypothetical protein. | Cytochrome c3. | 0.999 |
EAR15967.1 | rplA | RB2501_03695 | RB2501_02090 | Hypothetical protein. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.962 |
EAR15967.1 | rplK | RB2501_03695 | RB2501_02095 | Hypothetical protein. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.962 |
EAR15967.1 | rpsB | RB2501_03695 | RB2501_03815 | Hypothetical protein. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.966 |
EAR15967.1 | rpsL | RB2501_03695 | RB2501_09835 | Hypothetical protein. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.962 |
EAR15967.1 | tsf | RB2501_03695 | RB2501_03820 | Hypothetical protein. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.970 |
EAR15968.1 | EAR15967.1 | RB2501_03700 | RB2501_03695 | Hypothetical protein. | Hypothetical protein. | 0.999 |
EAR15968.1 | EAR15969.1 | RB2501_03700 | RB2501_03705 | Hypothetical protein. | Hypothetical protein. | 0.998 |
EAR15968.1 | EAR15970.1 | RB2501_03700 | RB2501_03710 | Hypothetical protein. | Molybdopterin oxidoredutase membrane subunit. | 0.999 |
EAR15968.1 | EAR15971.1 | RB2501_03700 | RB2501_03715 | Hypothetical protein. | Molybdopterin oxidoreductase, iron-sulfur binding subunit. | 0.998 |
EAR15968.1 | EAR15972.1 | RB2501_03700 | RB2501_03720 | Hypothetical protein. | Cytochrome c3. | 0.998 |
EAR15969.1 | EAR15967.1 | RB2501_03705 | RB2501_03695 | Hypothetical protein. | Hypothetical protein. | 0.999 |
EAR15969.1 | EAR15968.1 | RB2501_03705 | RB2501_03700 | Hypothetical protein. | Hypothetical protein. | 0.998 |
EAR15969.1 | EAR15970.1 | RB2501_03705 | RB2501_03710 | Hypothetical protein. | Molybdopterin oxidoredutase membrane subunit. | 0.999 |
EAR15969.1 | EAR15971.1 | RB2501_03705 | RB2501_03715 | Hypothetical protein. | Molybdopterin oxidoreductase, iron-sulfur binding subunit. | 0.998 |
EAR15969.1 | EAR15972.1 | RB2501_03705 | RB2501_03720 | Hypothetical protein. | Cytochrome c3. | 0.996 |
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