STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR16218.1Putative excisionase. (93 aa)    
Predicted Functional Partners:
EAR16216.1
Mobilization protein.
 
     0.852
EAR16154.1
Putative bacteriophage integrase; Belongs to the 'phage' integrase family.
 
   
 0.721
EAR16219.1
Ribose-phosphate pyrophosphokinase.
       0.566
EAR16215.1
Hypothetical protein.
       0.504
EAR16217.1
Hypothetical protein.
       0.504
EAR16265.1
Peptidase, M28 family protein.
  
     0.503
EAR15131.1
Hypothetical protein.
  
     0.483
EAR14721.1
Tyrosine type site-specific recombinase; Belongs to the 'phage' integrase family.
 
   
 0.467
EAR14045.1
Hypothetical protein.
 
     0.430
EAR16391.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Robiginitalea biformata
NCBI taxonomy Id: 313596
Other names: R. biformata HTCC2501, Robiginitalea biformata HTCC2501, Robiginitalea biformata str. HTCC2501, Robiginitalea biformata strain HTCC2501
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