Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAR15359.1 | EAR15427.1 | RB2501_13564 | RB2501_13904 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA polymerase III subunit beta. | 0.923 |
EAR15359.1 | EAR16248.1 | RB2501_13564 | RB2501_05100 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA ligase. | 0.938 |
EAR15359.1 | EAR16587.1 | RB2501_13564 | RB2501_06795 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Putative DNA polymerase III, delta subunit. | 0.965 |
EAR15359.1 | polA | RB2501_13564 | RB2501_03785 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.993 |
EAR15427.1 | EAR15359.1 | RB2501_13904 | RB2501_13564 | DNA polymerase III subunit beta. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.923 |
EAR15427.1 | EAR16248.1 | RB2501_13904 | RB2501_05100 | DNA polymerase III subunit beta. | DNA ligase. | 0.938 |
EAR15427.1 | EAR16587.1 | RB2501_13904 | RB2501_06795 | DNA polymerase III subunit beta. | Putative DNA polymerase III, delta subunit. | 0.936 |
EAR15427.1 | polA | RB2501_13904 | RB2501_03785 | DNA polymerase III subunit beta. | Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.990 |
EAR16247.1 | EAR16248.1 | RB2501_05095 | RB2501_05100 | Hypothetical protein. | DNA ligase. | 0.997 |
EAR16247.1 | EAR16249.1 | RB2501_05095 | RB2501_05105 | Hypothetical protein. | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | 0.957 |
EAR16247.1 | EAR16250.1 | RB2501_05095 | RB2501_05110 | Hypothetical protein. | Hypothetical protein. | 0.939 |
EAR16247.1 | EAR16251.1 | RB2501_05095 | RB2501_05115 | Hypothetical protein. | Hypothetical protein. | 0.713 |
EAR16247.1 | polA | RB2501_05095 | RB2501_03785 | Hypothetical protein. | Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.590 |
EAR16248.1 | EAR15359.1 | RB2501_05100 | RB2501_13564 | DNA ligase. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.938 |
EAR16248.1 | EAR15427.1 | RB2501_05100 | RB2501_13904 | DNA ligase. | DNA polymerase III subunit beta. | 0.938 |
EAR16248.1 | EAR16247.1 | RB2501_05100 | RB2501_05095 | DNA ligase. | Hypothetical protein. | 0.997 |
EAR16248.1 | EAR16249.1 | RB2501_05100 | RB2501_05105 | DNA ligase. | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal. | 0.956 |
EAR16248.1 | EAR16250.1 | RB2501_05100 | RB2501_05110 | DNA ligase. | Hypothetical protein. | 0.944 |
EAR16248.1 | EAR16251.1 | RB2501_05100 | RB2501_05115 | DNA ligase. | Hypothetical protein. | 0.716 |
EAR16248.1 | EAR16587.1 | RB2501_05100 | RB2501_06795 | DNA ligase. | Putative DNA polymerase III, delta subunit. | 0.762 |
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