STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_18880Hypothetical protein; Nsp18880; ORF_ID:nsp18880. (207 aa)    
Predicted Functional Partners:
NSP_18890
Transposase, IS605 OrfB; Nsp18890; ORF_ID:nsp18890.
       0.773
NSP_33740
ISSoc2, resolvase; Nsp33740; ORF_ID:nsp33740.
  
     0.753
NSP_49890
Hypothetical protein; Nsp49890; ORF_ID:nsp49890.
  
     0.753
NSP_18870
WD-40 repeat protein; Nsp18870; ORF_ID:nsp18870.
       0.658
NSP_18860
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Nsp18860; ORF_ID:nsp18860.
       0.450
NSP_18900
Hypothetical protein; Nsp18900; ORF_ID:nsp18900.
       0.431
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.