STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
deoCDeoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (224 aa)    
Predicted Functional Partners:
NSP_28610
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
 
  0.888
NSP_32910
Phosphoenolpyruvate synthase; Nsp32910; ORF_ID:nsp32910.
    
 0.842
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
      0.840
NSP_1710
Pyruvate kinase; Nsp1710; ORF_ID:nsp1710; Belongs to the pyruvate kinase family.
    
 0.834
NSP_51200
Ribokinase; Nsp51200; ORF_ID:nsp51200.
   
 0.819
NSP_25080
Proline dehydrogenase (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase; Nsp25080; ORF_ID:nsp25080; Belongs to the aldehyde dehydrogenase family.
  
 0.775
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
 0.774
NSP_16540
Aldehyde dehydrogenase; Nsp16540; ORF_ID:nsp16540; Belongs to the aldehyde dehydrogenase family.
  
 0.723
NSP_36320
Succinate-semialdehyde dehydrogenase [NAD]; Nsp36320; ORF_ID:nsp36320.
  
 0.723
NSP_48640
Aldehyde dehydrogenase; Nsp48640; ORF_ID:nsp48640; Belongs to the aldehyde dehydrogenase family.
  
 0.723
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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