STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_38590Dienelactone hydrolase family protein; Nsp38590; ORF_ID:nsp38590. (279 aa)    
Predicted Functional Partners:
NSP_44470
Hypothetical protein; Nsp44470; ORF_ID:nsp44470.
  
    0.716
NSP_26950
Long-chain-fatty-acid--CoA ligase; Nsp26950; ORF_ID:nsp26950.
  
 
  0.562
NSP_4540
Transcription regulator [contains diacylglycerol kinase catalytic domain]; Nsp4540; ORF_ID:nsp4540.
     
 0.561
NSP_38580
Oligopeptidase A; Nsp38580; ORF_ID:nsp38580.
       0.554
fbp
Fructose-1,6-bisphosphatase, type I; Nsp50460; ORF_ID:nsp50460; Belongs to the FBPase class 1 family.
   
 
  0.501
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.497
NSP_50530
Long-chain-fatty-acid--CoA ligase; Nsp50530; ORF_ID:nsp50530.
    
  0.456
NSP_26920
Long-chain-fatty-acid--CoA ligase; Nsp26920; ORF_ID:nsp26920.
    
  0.450
NSP_25190
N-Acetylneuraminate cytidylyltransferase; Nsp25190; ORF_ID:nsp25190.
  
  
 0.413
NSP_45530
N-Acetylneuraminate cytidylyltransferase; Nsp45530; ORF_ID:nsp45530.
  
  
 0.405
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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