STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_41190[NiFe] hydrogenase metallocenter assembly protein HypD; Nsp41190; ORF_ID:nsp41190. (379 aa)    
Predicted Functional Partners:
NSP_41180
[NiFe] hydrogenase metallocenter assembly protein HypC; Nsp41180; ORF_ID:nsp41180.
 
 
 0.999
NSP_41210
[NiFe] hydrogenase metallocenter assembly protein HypE; Nsp41210; ORF_ID:nsp41210.
 
 0.999
NSP_41230
[NiFe] hydrogenase nickel incorporation-associated protein HypB; Nsp41230; ORF_ID:nsp41230.
 
  
 0.963
NSP_41170
[NiFe] hydrogenase metallocenter assembly protein HypF; Nsp41170; ORF_ID:nsp41170.
 
  
 0.937
hypA
[NiFe] hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.897
NSP_41090
Uptake hydrogenase large subunit; Nsp41090; ORF_ID:nsp41090.
 
 
 0.878
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
  
 0.790
NSP_41100
Uptake hydrogenase small subunit precursor; Nsp41100; ORF_ID:nsp41100.
 
  
 0.788
NSP_41000
Uptake hydrogenase large subunit; Nsp41000; ORF_ID:nsp41000.
 
 
 0.778
NSP_28060
NAD-reducing hydrogenase subunit HoxH; Nsp28060; ORF_ID:nsp28060.
 
   
 0.683
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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