STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_48060Putative prophage protein (ps3); Nsp48060; ORF_ID:nsp48060. (195 aa)    
Predicted Functional Partners:
NSP_48050
Hypothetical protein; Nsp48050; ORF_ID:nsp48050.
       0.773
NSP_20890
Hypothetical protein; Nsp20890; ORF_ID:nsp20890.
  
     0.695
NSP_48040
Hypothetical protein; Nsp48040; ORF_ID:nsp48040.
       0.581
NSP_48070
Cobalt-precorrin-2 C20-methyltransferase; Nsp48070; ORF_ID:nsp48070; Belongs to the precorrin methyltransferase family.
       0.491
NSP_48080
Cobalt-precorrin-8x methylmutase; Nsp48080; ORF_ID:nsp48080.
       0.491
NSP_28510
Hypothetical protein; Nsp28510; ORF_ID:nsp28510.
  
     0.478
NSP_17060
Hypothetical protein; Nsp17060; ORF_ID:nsp17060.
  
     0.435
NSP_35220
Hypothetical protein; Nsp35220; ORF_ID:nsp35220.
  
     0.429
NSP_47080
Transposase; Nsp47080; ORF_ID:nsp47080.
  
     0.411
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.