STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_6080TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex; Nsp6080; ORF_ID:nsp6080. (436 aa)    
Predicted Functional Partners:
NSP_19580
TldD family protein, Beta/Gamma-proteobacterial subgroup; Nsp19580; ORF_ID:nsp19580.
  
     0.702
NSP_6070
Hypothetical protein; Nsp6070; ORF_ID:nsp6070.
       0.473
NSP_6090
Chloride channel protein; Nsp6090; ORF_ID:nsp6090.
       0.470
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.