STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP_8680Putative glycosyltransferase; Nsp8680; ORF_ID:nsp8680. (294 aa)    
Predicted Functional Partners:
NSP_14830
Glycosyltransferase; Nsp14830; ORF_ID:nsp14830.
 
 
  0.707
NSP_23110
Hypothetical protein; Nsp23110; ORF_ID:nsp23110.
 
 
  0.663
NSP_47380
ABC-type Fe3+-siderophore transport system, permease component; Nsp47380; ORF_ID:nsp47380.
  
     0.655
NSP_39100
Hypothetical protein; Nsp39100; ORF_ID:nsp39100.
  
     0.627
NSP_14790
Bacterial cell division membrane protein; Nsp14790; ORF_ID:nsp14790.
  
    0.626
NSP_32890
Hypothetical protein; Nsp32890; ORF_ID:nsp32890.
  
     0.591
NSP_34600
Putative glycosyl transferase; Nsp34600; ORF_ID:nsp34600.
  
  
  0.528
NSP_47410
Hypothetical protein; Nsp47410; ORF_ID:nsp47410.
 
  
 0.517
NSP_15040
Mannose-1-phosphate guanylyltransferase / Phosphomannomutase; Nsp15040; ORF_ID:nsp15040.
  
 0.516
NSP_26720
Malonyl CoA-acyl carrier protein transacylase; Nsp26720; ORF_ID:nsp26720.
  
 0.497
Your Current Organism:
Nodularia spumigena
NCBI taxonomy Id: 313624
Other names: N. spumigena CCY9414, Nodularia spumigena CCY9414
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