STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28126.1Hypothetical protein; COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division. (426 aa)    
Predicted Functional Partners:
EDM28127.1
ABC transporter, ATPase subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  0.939
EDM25350.1
Transmembrane ATP-binding ABC transporter protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 0.881
EDM28122.1
Molybdenum ABC transporter, periplasmic molybdate-binding protein; COG0725 ABC-type molybdate transport system, periplasmic component.
 
     0.877
EDM28124.1
COG3839 ABC-type sugar transport systems, ATPase components.
 
     0.808
EDM28123.1
Molybdenum ABC transporter, permease protein; COG0555 ABC-type sulfate transport system, permease component.
 
     0.799
EDM28125.1
Hypothetical protein.
       0.773
EDM28643.1
ABC transporter, probable ATP-binding subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
  0.744
EDM28129.1
MoeZ/MoeB; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
 
    0.724
EDM28646.1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.718
EDM28645.1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
  
     0.714
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.