STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28148.1Hypothetical protein; COG1340 Uncharacterized archaeal coiled-coil protein. (1055 aa)    
Predicted Functional Partners:
EDM28149.1
Hypothetical protein; COG3119 Arylsulfatase A and related enzymes.
 
     0.946
EDM27233.1
Cytochrome c, class I; COG2863 Cytochrome c553.
  
 0.863
EDM24773.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
  0.815
EDM26581.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
  
     0.775
EDM24990.1
Hypothetical protein; COG3083 Predicted hydrolase of alkaline phosphatase superfamily.
  
     0.775
EDM28693.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.775
EDM28474.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.775
EDM27716.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.775
EDM29260.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.775
EDM28609.1
Hypothetical protein.
  
     0.774
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.