node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ELI_04125 | ELI_05370 | ELI_04125 | ELI_05370 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | Hypothetical protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | 0.660 |
ELI_04125 | ELI_06220 | ELI_04125 | ELI_06220 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | DNA polymerase III delta prime subunit; COG0470 ATPase involved in DNA replication. | 0.587 |
ELI_04125 | ELI_07330 | ELI_04125 | ELI_07330 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.908 |
ELI_04125 | ELI_08410 | ELI_04125 | ELI_08410 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | DNA topoisomeraseI, putative; COG3569 topoisomeraseIB. | 0.751 |
ELI_04125 | ELI_11970 | ELI_04125 | ELI_11970 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | COG0708 Exonuclease III. | 0.521 |
ELI_04125 | ELI_12950 | ELI_04125 | ELI_12950 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | Hypothetical protein; COG0708 Exonuclease III. | 0.584 |
ELI_04125 | ELI_13170 | ELI_04125 | ELI_13170 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | Hypothetical protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing. | 0.651 |
ELI_04125 | dinB | ELI_04125 | ELI_09915 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | Putative DNA damage-inducible protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.527 |
ELI_04125 | ku | ELI_04125 | ELI_04130 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | Hypothetical protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. | 0.987 |
ELI_04125 | polA | ELI_04125 | ELI_14330 | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.895 |
ELI_05370 | ELI_04125 | ELI_05370 | ELI_04125 | Hypothetical protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | 0.660 |
ELI_05370 | ELI_06220 | ELI_05370 | ELI_06220 | Hypothetical protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | DNA polymerase III delta prime subunit; COG0470 ATPase involved in DNA replication. | 0.469 |
ELI_05370 | ELI_07330 | ELI_05370 | ELI_07330 | Hypothetical protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.900 |
ELI_05370 | polA | ELI_05370 | ELI_14330 | Hypothetical protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.716 |
ELI_06220 | ELI_04125 | ELI_06220 | ELI_04125 | DNA polymerase III delta prime subunit; COG0470 ATPase involved in DNA replication. | Hypothetical protein; COG1793 ATP-dependent DNA ligase. | 0.587 |
ELI_06220 | ELI_05370 | ELI_06220 | ELI_05370 | DNA polymerase III delta prime subunit; COG0470 ATPase involved in DNA replication. | Hypothetical protein; COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. | 0.469 |
ELI_06220 | ELI_07330 | ELI_06220 | ELI_07330 | DNA polymerase III delta prime subunit; COG0470 ATPase involved in DNA replication. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
ELI_06220 | ELI_11970 | ELI_06220 | ELI_11970 | DNA polymerase III delta prime subunit; COG0470 ATPase involved in DNA replication. | COG0708 Exonuclease III. | 0.429 |
ELI_06220 | ELI_12950 | ELI_06220 | ELI_12950 | DNA polymerase III delta prime subunit; COG0470 ATPase involved in DNA replication. | Hypothetical protein; COG0708 Exonuclease III. | 0.429 |
ELI_06220 | dinB | ELI_06220 | ELI_09915 | DNA polymerase III delta prime subunit; COG0470 ATPase involved in DNA replication. | Putative DNA damage-inducible protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.494 |