STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_04410COG1230 Co/Zn/Cd efflux system component. (317 aa)    
Predicted Functional Partners:
ELI_04415
Hypothetical protein.
   
 0.839
ELI_04420
COG1230 Co/Zn/Cd efflux system component.
 
    
0.838
ELI_04425
Cadmium translocating P-type ATPase; COG2217 Cation transport ATPase.
  
  
 0.832
ELI_04430
Hypothetical protein.
       0.511
ELI_04405
COG4772 Outer membrane receptor for Fe3+-dicitrate.
       0.444
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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