STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_06830COG2348 Uncharacterized protein involved in methicillin resistance. (354 aa)    
Predicted Functional Partners:
ELI_06825
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
 
     0.954
ELI_06835
COG0726 Predicted xylanase/chitin deacetylase.
 
     0.954
ELI_06820
Hypothetical protein.
 
     0.950
ELI_06840
General secretion pathway protein-related protein; COG3267 Type II secretory pathway, component ExeA (predicted ATPase).
 
     0.940
ELI_06815
COG0367 Asparagine synthase (glutamine-hydrolyzing).
 
     0.938
ELI_06860
Putative polysaccharide export protein, outer membrane; COG1596 Periplasmic protein involved in polysaccharide export.
 
     0.917
ELI_06855
Chain length determinant protein.
 
     0.916
ELI_06850
Possible capsular polysaccharide biosynthesis protein; COG0489 ATPases involved in chromosome partitioning.
 
   
 0.911
ELI_12105
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
 
     0.790
ELI_06880
Hypothetical protein.
 
     0.778
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.