Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ELI_04825 | ELI_05940 | ELI_04825 | ELI_05940 | Chemotaxis protein CheYIV; COG0784 FOG: CheY-like receiver. | COG0840 Methyl-accepting chemotaxis protein. | 0.588 |
ELI_04825 | ELI_07735 | ELI_04825 | ELI_07735 | Chemotaxis protein CheYIV; COG0784 FOG: CheY-like receiver. | Two-component response regulator; COG0642 Signal transduction histidine kinase. | 0.849 |
ELI_04825 | ELI_11235 | ELI_04825 | ELI_11235 | Chemotaxis protein CheYIV; COG0784 FOG: CheY-like receiver. | COG0840 Methyl-accepting chemotaxis protein. | 0.633 |
ELI_04825 | ELI_11245 | ELI_04825 | ELI_11245 | Chemotaxis protein CheYIV; COG0784 FOG: CheY-like receiver. | Protein-glutamate O-methyltransferase; COG1352 Methylase of chemotaxis methyl-accepting proteins. | 0.576 |
ELI_04825 | ELI_11265 | ELI_04825 | ELI_11265 | Chemotaxis protein CheYIV; COG0784 FOG: CheY-like receiver. | COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.665 |
ELI_04825 | ELI_11790 | ELI_04825 | ELI_11790 | Chemotaxis protein CheYIV; COG0784 FOG: CheY-like receiver. | Hypothetical protein; COG2203 FOG: GAF domain. | 0.612 |
ELI_04825 | cheB | ELI_04825 | ELI_11250 | Chemotaxis protein CheYIV; COG0784 FOG: CheY-like receiver. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.631 |
ELI_05940 | ELI_04825 | ELI_05940 | ELI_04825 | COG0840 Methyl-accepting chemotaxis protein. | Chemotaxis protein CheYIV; COG0784 FOG: CheY-like receiver. | 0.588 |
ELI_05940 | ELI_07735 | ELI_05940 | ELI_07735 | COG0840 Methyl-accepting chemotaxis protein. | Two-component response regulator; COG0642 Signal transduction histidine kinase. | 0.581 |
ELI_05940 | ELI_11235 | ELI_05940 | ELI_11235 | COG0840 Methyl-accepting chemotaxis protein. | COG0840 Methyl-accepting chemotaxis protein. | 0.929 |
ELI_05940 | ELI_11245 | ELI_05940 | ELI_11245 | COG0840 Methyl-accepting chemotaxis protein. | Protein-glutamate O-methyltransferase; COG1352 Methylase of chemotaxis methyl-accepting proteins. | 0.988 |
ELI_05940 | ELI_11255 | ELI_05940 | ELI_11255 | COG0840 Methyl-accepting chemotaxis protein. | Chemotaxis response regulator; COG0784 FOG: CheY-like receiver. | 0.980 |
ELI_05940 | ELI_11260 | ELI_05940 | ELI_11260 | COG0840 Methyl-accepting chemotaxis protein. | Hypothetical protein; COG0835 Chemotaxis signal transduction protein. | 0.983 |
ELI_05940 | ELI_11265 | ELI_05940 | ELI_11265 | COG0840 Methyl-accepting chemotaxis protein. | COG0643 Chemotaxis protein histidine kinase and related kinases. | 0.996 |
ELI_05940 | ELI_11790 | ELI_05940 | ELI_11790 | COG0840 Methyl-accepting chemotaxis protein. | Hypothetical protein; COG2203 FOG: GAF domain. | 0.541 |
ELI_05940 | cheB | ELI_05940 | ELI_11250 | COG0840 Methyl-accepting chemotaxis protein. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.987 |
ELI_07735 | ELI_04825 | ELI_07735 | ELI_04825 | Two-component response regulator; COG0642 Signal transduction histidine kinase. | Chemotaxis protein CheYIV; COG0784 FOG: CheY-like receiver. | 0.849 |
ELI_07735 | ELI_05940 | ELI_07735 | ELI_05940 | Two-component response regulator; COG0642 Signal transduction histidine kinase. | COG0840 Methyl-accepting chemotaxis protein. | 0.581 |
ELI_07735 | ELI_11235 | ELI_07735 | ELI_11235 | Two-component response regulator; COG0642 Signal transduction histidine kinase. | COG0840 Methyl-accepting chemotaxis protein. | 0.572 |
ELI_07735 | ELI_11245 | ELI_07735 | ELI_11245 | Two-component response regulator; COG0642 Signal transduction histidine kinase. | Protein-glutamate O-methyltransferase; COG1352 Methylase of chemotaxis methyl-accepting proteins. | 0.666 |
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