STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ80148.1Hypothetical protein; COG0457 FOG: TPR repeat. (379 aa)    
Predicted Functional Partners:
EAQ80410.1
PAS protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
    
 0.785
ribBA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.741
EAQ81791.1
TPR repeat protein; COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family.
  
   0.725
EAQ82042.1
Probable sensor/response regulator hybrid; COG0642 Signal transduction histidine kinase.
  
 
 0.723
EAQ80149.1
Hypothetical protein.
       0.694
EAQ78282.1
O-linked GlcNAc transferase-putative TPR repeat containing protein-like; COG0457 FOG: TPR repeat.
 
     0.683
EAQ82054.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.672
EAQ80150.1
Probable type II secretion system protein; COG4964 Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.656
EAQ77997.1
O-linked GlcNAc transferase; COG0457 FOG: TPR repeat.
  
   0.639
EAQ82553.1
Probable O-linked GlcNAc transferase; COG2452 Predicted site-specific integrase-resolvase.
  
     0.635
Your Current Organism:
Blastopirellula marina
NCBI taxonomy Id: 314230
Other names: B. marina DSM 3645, Blastopirellula marina DSM 3645, Blastopirellula marina str. DSM 3645, Blastopirellula marina strain DSM 3645
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.