STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ05221.1Multidrug resistance efflux protein, SMR family; COG2076 Membrane transporters of cations and cationic drugs. (111 aa)    
Predicted Functional Partners:
EAQ05222.1
Hypothetical protein.
       0.853
EAQ05220.1
EF-Tu; COG1217 Predicted membrane GTPase involved in stress response.
       0.711
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
  
 0.417
EAQ07445.1
COG4787 Flagellar basal body rod protein.
    
   0.413
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.