STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06270.1COG1112 Superfamily I DNA and RNA helicases and helicase subunits. (1804 aa)    
Predicted Functional Partners:
EAQ06269.1
Hypothetical protein.
       0.868
EAQ06273.1
COG1002 Type II restriction enzyme, methylase subunits.
  
  
 0.824
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
  
    0.786
EAQ05491.1
Metal dependent phosphohydrolase; COG1418 Predicted HD superfamily hydrolase.
 
    0.724
EAQ05489.1
Hypothetical protein; COG1418 Predicted HD superfamily hydrolase.
 
    0.713
EAQ06274.1
ATP-dependent helicase HepA; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
       0.687
EAQ07183.1
DNA-methyltransferase, type I restriction-modification enzymeubunit M.
  
  
 0.666
EAQ05497.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.649
EAQ05499.1
Putative phage integrase; COG0582 Integrase; Belongs to the 'phage' integrase family.
  
    0.643
EAQ07550.1
Hypothetical protein; COG3893 Inactivated superfamily I helicase.
  
   0.630
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.