truA protein (Yoonia vestfoldensis SKA53) - STRING interaction network

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truA

tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (257 aa)

Predicted Functional Partners:

rpoA

0.897

rplQ

0.840

truB

0.839

rsmH

0.817

rpoC

0.762

EAQ06940.1

0.717

EAQ07742.1

0.707

EAQ07743.1

0.707

trmB

0.694

EAQ06939.1

0.682

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ06939.1	EAQ06940.1	SKA53_15366	SKA53_15371	COG1122 ABC-type cobalt transport system, ATPase component.	Hypothetical protein; COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.	0.999
EAQ06939.1	truA	SKA53_15366	SKA53_12943	COG1122 ABC-type cobalt transport system, ATPase component.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.682
EAQ06940.1	EAQ06939.1	SKA53_15371	SKA53_15366	Hypothetical protein; COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.	COG1122 ABC-type cobalt transport system, ATPase component.	0.999
EAQ06940.1	truA	SKA53_15371	SKA53_12943	Hypothetical protein; COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.717
EAQ07742.1	EAQ07743.1	SKA53_12933	SKA53_12938	COG3768 Predicted membrane protein.	Hypothetical protein; COG3106 Predicted ATPase.	0.994
EAQ07742.1	truA	SKA53_12933	SKA53_12943	COG3768 Predicted membrane protein.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.707
EAQ07743.1	EAQ07742.1	SKA53_12938	SKA53_12933	Hypothetical protein; COG3106 Predicted ATPase.	COG3768 Predicted membrane protein.	0.994
EAQ07743.1	truA	SKA53_12938	SKA53_12943	Hypothetical protein; COG3106 Predicted ATPase.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.707
rplQ	rpoA	SKA53_13466	SKA53_13461	COG0203 Ribosomal protein L17.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994
rplQ	rpoC	SKA53_13466	SKA53_13278	COG0203 Ribosomal protein L17.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rplQ	truA	SKA53_13466	SKA53_12943	COG0203 Ribosomal protein L17.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.840
rplQ	truB	SKA53_13466	SKA53_12583	COG0203 Ribosomal protein L17.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.744
rpoA	rplQ	SKA53_13461	SKA53_13466	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	COG0203 Ribosomal protein L17.	0.994
rpoA	rpoC	SKA53_13461	SKA53_13278	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	truA	SKA53_13461	SKA53_12943	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.897
rpoA	truB	SKA53_13461	SKA53_12583	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.817
rpoC	rplQ	SKA53_13278	SKA53_13466	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	COG0203 Ribosomal protein L17.	0.999
rpoC	rpoA	SKA53_13278	SKA53_13461	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rsmH	SKA53_13278	SKA53_07301	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.420
rpoC	truA	SKA53_13278	SKA53_12943	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.	0.762