STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAP90938.1Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. (391 aa)    
Predicted Functional Partners:
EAP90936.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  0.986
EAP90935.1
Acriflavin resistance protein; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.923
lolD
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.887
EAP90734.1
ABC efflux transporter, ATP-binding protein, putative; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 0.887
EAP90937.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    
0.872
EAP91092.1
ATP-binding protein of ABC transporter; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  0.865
EAP89705.1
Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.779
EAP91091.1
Secretion protein HlyD; COG0845 Membrane-fusion protein.
 
     0.646
EAP91093.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 
0.574
Your Current Organism:
Oceanicaulis sp. HTCC2633
NCBI taxonomy Id: 314254
Other names: O. sp. HTCC2633
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