STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR49781.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
EAR50412.1
Hypothetical protein; COG1372 Intein/homing endonuclease.
  
 
  0.775
EAR49872.1
Hypothetical protein.
 
 
   0.734
EAR52484.1
Lipoprotein, putative.
  
 
  0.714
EAR52994.1
core-2/I-branching enzyme family protein.
  
     0.655
EAR50154.1
Hypothetical protein.
  
     0.651
EAR52238.1
Hypothetical protein.
  
     0.647
EAR49958.1
COG4932 Predicted outer membrane protein.
  
     0.641
EAR50633.1
Hypothetical protein.
  
     0.623
EAR51074.1
Hypothetical protein; COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain.
   
   0.619
EAR51075.1
Hypothetical protein.
   
   0.619
Your Current Organism:
Oceanicola granulosus
NCBI taxonomy Id: 314256
Other names: O. granulosus HTCC2516, Oceanicola granulosus HTCC2516, Oceanicola granulosus KCTC 12143, Oceanicola granulosus str. HTCC2516, Oceanicola granulosus strain HTCC2516
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.