STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADM08222.1Putative conjugative transfer factor, TraB. (418 aa)    
Predicted Functional Partners:
ADM08221.1
Predicted protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
     0.889
ADM08209.1
TraH.
 
     0.882
ADM08211.1
Hypothetical protein.
 
     0.882
ADM08212.1
Hypothetical protein.
 
     0.882
ADM08214.1
Putative conjugative transfer protein TraU.
 
     0.882
ADM08215.1
Hypothetical protein.
 
     0.882
ADM08208.1
TraG.
 
     0.881
ADM08216.1
Hypothetical protein.
 
     0.881
ADM08219.1
TraC.
 
   
 0.873
ADM08223.1
Hypothetical protein.
       0.800
Your Current Organism:
Parvularcula bermudensis
NCBI taxonomy Id: 314260
Other names: P. bermudensis HTCC2503, Parvularcula bermudensis HTCC2503, Parvularcula bermudensis str. HTCC2503, Parvularcula bermudensis strain HTCC2503
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