Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADM08208.1 | ADM08209.1 | PB2503_00637 | PB2503_00642 | TraG. | TraH. | 0.953 |
ADM08208.1 | ADM08211.1 | PB2503_00637 | PB2503_00652 | TraG. | Hypothetical protein. | 0.950 |
ADM08208.1 | ADM08212.1 | PB2503_00637 | PB2503_00657 | TraG. | Hypothetical protein. | 0.951 |
ADM08208.1 | ADM08214.1 | PB2503_00637 | PB2503_00667 | TraG. | Putative conjugative transfer protein TraU. | 0.949 |
ADM08208.1 | ADM08215.1 | PB2503_00637 | PB2503_00672 | TraG. | Hypothetical protein. | 0.950 |
ADM08208.1 | ADM08216.1 | PB2503_00637 | PB2503_00677 | TraG. | Hypothetical protein. | 0.949 |
ADM08208.1 | ADM08219.1 | PB2503_00637 | PB2503_00692 | TraG. | TraC. | 0.944 |
ADM08208.1 | ADM08221.1 | PB2503_00637 | PB2503_00702 | TraG. | Predicted protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.909 |
ADM08208.1 | ADM08222.1 | PB2503_00637 | PB2503_00707 | TraG. | Putative conjugative transfer factor, TraB. | 0.881 |
ADM08208.1 | ADM08223.1 | PB2503_00637 | PB2503_00712 | TraG. | Hypothetical protein. | 0.494 |
ADM08209.1 | ADM08208.1 | PB2503_00642 | PB2503_00637 | TraH. | TraG. | 0.953 |
ADM08209.1 | ADM08211.1 | PB2503_00642 | PB2503_00652 | TraH. | Hypothetical protein. | 0.953 |
ADM08209.1 | ADM08212.1 | PB2503_00642 | PB2503_00657 | TraH. | Hypothetical protein. | 0.953 |
ADM08209.1 | ADM08214.1 | PB2503_00642 | PB2503_00667 | TraH. | Putative conjugative transfer protein TraU. | 0.958 |
ADM08209.1 | ADM08215.1 | PB2503_00642 | PB2503_00672 | TraH. | Hypothetical protein. | 0.952 |
ADM08209.1 | ADM08216.1 | PB2503_00642 | PB2503_00677 | TraH. | Hypothetical protein. | 0.951 |
ADM08209.1 | ADM08219.1 | PB2503_00642 | PB2503_00692 | TraH. | TraC. | 0.946 |
ADM08209.1 | ADM08221.1 | PB2503_00642 | PB2503_00702 | TraH. | Predicted protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.904 |
ADM08209.1 | ADM08222.1 | PB2503_00642 | PB2503_00707 | TraH. | Putative conjugative transfer factor, TraB. | 0.882 |
ADM08209.1 | ADM08223.1 | PB2503_00642 | PB2503_00712 | TraH. | Hypothetical protein. | 0.504 |
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