Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADM08330.1 | ADM08556.1 | PB2503_01252 | PB2503_02392 | Putative response regulatory protein. | Putative diguanylate cyclase (GGDEF). | 0.956 |
ADM08330.1 | ADM08854.1 | PB2503_01252 | PB2503_03897 | Putative response regulatory protein. | Sensor histidine kinase/response regulator. | 0.899 |
ADM08330.1 | ADM09408.1 | PB2503_01252 | PB2503_06712 | Putative response regulatory protein. | Sensory box/GGDEF domain/EAL domain protein. | 0.971 |
ADM08330.1 | ADM09516.1 | PB2503_01252 | PB2503_07252 | Putative response regulatory protein. | Sensor histidine kinase/response regulator. | 0.957 |
ADM08330.1 | ADM09662.1 | PB2503_01252 | PB2503_08034 | Putative response regulatory protein. | Two-component sensor histidine kinase. | 0.959 |
ADM08330.1 | ADM09688.1 | PB2503_01252 | PB2503_08164 | Putative response regulatory protein. | Non-motile and phage-resistance protein. | 0.937 |
ADM08330.1 | ADM09749.1 | PB2503_01252 | PB2503_08469 | Putative response regulatory protein. | FOG: GGDEF domain protein. | 0.949 |
ADM08330.1 | ADM09903.1 | PB2503_01252 | PB2503_09249 | Putative response regulatory protein. | Two-component hybrid sensor and regulator. | 0.924 |
ADM08330.1 | ADM10716.1 | PB2503_01252 | PB2503_13394 | Putative response regulatory protein. | Sensor histidine kinase/response regulator. | 0.887 |
ADM08330.1 | fliP | PB2503_01252 | PB2503_07854 | Putative response regulatory protein. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.919 |
ADM08556.1 | ADM08330.1 | PB2503_02392 | PB2503_01252 | Putative diguanylate cyclase (GGDEF). | Putative response regulatory protein. | 0.956 |
ADM08556.1 | ADM08854.1 | PB2503_02392 | PB2503_03897 | Putative diguanylate cyclase (GGDEF). | Sensor histidine kinase/response regulator. | 0.922 |
ADM08556.1 | ADM09516.1 | PB2503_02392 | PB2503_07252 | Putative diguanylate cyclase (GGDEF). | Sensor histidine kinase/response regulator. | 0.947 |
ADM08556.1 | ADM09662.1 | PB2503_02392 | PB2503_08034 | Putative diguanylate cyclase (GGDEF). | Two-component sensor histidine kinase. | 0.990 |
ADM08556.1 | ADM09688.1 | PB2503_02392 | PB2503_08164 | Putative diguanylate cyclase (GGDEF). | Non-motile and phage-resistance protein. | 0.966 |
ADM08556.1 | ADM09749.1 | PB2503_02392 | PB2503_08469 | Putative diguanylate cyclase (GGDEF). | FOG: GGDEF domain protein. | 0.899 |
ADM08556.1 | ADM09903.1 | PB2503_02392 | PB2503_09249 | Putative diguanylate cyclase (GGDEF). | Two-component hybrid sensor and regulator. | 0.906 |
ADM08556.1 | ADM10716.1 | PB2503_02392 | PB2503_13394 | Putative diguanylate cyclase (GGDEF). | Sensor histidine kinase/response regulator. | 0.943 |
ADM08854.1 | ADM08330.1 | PB2503_03897 | PB2503_01252 | Sensor histidine kinase/response regulator. | Putative response regulatory protein. | 0.899 |
ADM08854.1 | ADM08556.1 | PB2503_03897 | PB2503_02392 | Sensor histidine kinase/response regulator. | Putative diguanylate cyclase (GGDEF). | 0.922 |
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