Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADM08372.1 | ADM08464.1 | PB2503_01467 | PB2503_01927 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA ligase. | 0.992 |
ADM08372.1 | ADM08895.1 | PB2503_01467 | PB2503_04102 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease III. | 0.744 |
ADM08372.1 | ADM09610.1 | PB2503_01467 | PB2503_07774 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.500 |
ADM08372.1 | ADM10270.1 | PB2503_01467 | PB2503_11114 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase III, delta prime subunit. | 0.999 |
ADM08372.1 | polA | PB2503_01467 | PB2503_04342 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.998 |
ADM08463.1 | ADM08464.1 | PB2503_01922 | PB2503_01927 | Hypothetical protein. | DNA ligase. | 0.996 |
ADM08463.1 | ADM08520.1 | PB2503_01922 | PB2503_02207 | Hypothetical protein. | ATP-dependent helicase. | 0.787 |
ADM08463.1 | ADM08641.1 | PB2503_01922 | PB2503_02822 | Hypothetical protein. | Hypothetical protein. | 0.802 |
ADM08463.1 | ADM09610.1 | PB2503_01922 | PB2503_07774 | Hypothetical protein. | Hypothetical protein. | 0.558 |
ADM08463.1 | polA | PB2503_01922 | PB2503_04342 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.777 |
ADM08464.1 | ADM08372.1 | PB2503_01927 | PB2503_01467 | DNA ligase. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.992 |
ADM08464.1 | ADM08463.1 | PB2503_01927 | PB2503_01922 | DNA ligase. | Hypothetical protein. | 0.996 |
ADM08464.1 | ADM08520.1 | PB2503_01927 | PB2503_02207 | DNA ligase. | ATP-dependent helicase. | 0.786 |
ADM08464.1 | ADM08641.1 | PB2503_01927 | PB2503_02822 | DNA ligase. | Hypothetical protein. | 0.822 |
ADM08464.1 | ADM08895.1 | PB2503_01927 | PB2503_04102 | DNA ligase. | Exodeoxyribonuclease III. | 0.715 |
ADM08464.1 | ADM09610.1 | PB2503_01927 | PB2503_07774 | DNA ligase. | Hypothetical protein. | 0.813 |
ADM08464.1 | ADM09733.1 | PB2503_01927 | PB2503_08389 | DNA ligase. | Peptidase S26A, signal peptidase I; Belongs to the peptidase S26 family. | 0.738 |
ADM08464.1 | ADM10270.1 | PB2503_01927 | PB2503_11114 | DNA ligase. | DNA polymerase III, delta prime subunit. | 0.875 |
ADM08464.1 | ligA | PB2503_01927 | PB2503_09139 | DNA ligase. | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.936 |
ADM08464.1 | polA | PB2503_01927 | PB2503_04342 | DNA ligase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.946 |
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