STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ43586.1Secreted hemolysin-type calcium-binding bacteriocin, putative; COG2931 RTX toxins and related Ca2+-binding proteins. (3377 aa)    
Predicted Functional Partners:
EAQ47135.1
Hypothetical protein; COG5295 Autotransporter adhesin.
  
  0.609
EAQ43582.1
Rhizobiocin secretion protein rspD; COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
 
 
 0.567
EAQ47205.1
Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.542
EAQ47734.1
Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.535
EAQ44257.1
Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
     
 0.524
EAQ43873.1
Integrase/recombinase; COG0582 Integrase; Belongs to the 'phage' integrase family.
    
 
 0.499
EAQ47012.1
Putative Hemin receptor protein HmuR; COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
 
 0.499
EAQ44610.1
Hypothetical protein.
   
   0.492
EAQ44611.1
Hypothetical protein.
   
   0.492
EAQ43580.1
Putative toxin secretion transmembrane protein; COG0845 Membrane-fusion protein.
 
  
 0.482
Your Current Organism:
Roseobacter sp. MED193
NCBI taxonomy Id: 314262
Other names: R. sp. MED193
Server load: low (24%) [HD]