STRINGSTRING
R2601_00025 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00025" - Dihydrodipicolinate synthase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00025Dihydrodipicolinate synthase (292 aa)    
Predicted Functional Partners:
asd
Aspartate-beta-semialdehyde dehydrogenase ; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (340 aa)
 
 
  0.993
R2601_08626
4-hydroxy-tetrahydrodipicolinate reductase ; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (226 aa)
 
 
  0.987
R2601_17913
Aspartokinase (412 aa)
 
 
  0.903
R2601_17719
Homoserine dehydrogenase (428 aa)
 
 
  0.875
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
   
  0.858
lysA
Diaminopimelate decarboxylase ; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (421 aa)
   
  0.826
R2601_21957
Xanthine dehydrogenase family protein, small/large subunits (905 aa)
     
 
  0.818
R2601_21537
Aminotransferase, classes I and II (381 aa)
   
 
  0.806
R2601_18950
Aspartate aminotransferase (400 aa)
   
 
  0.806
R2601_16690
Aminotransferase, classes I and II (393 aa)
   
 
  0.806
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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