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R2601_00125 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00125" - Putative GntR-family transcriptional regulator in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00125Putative GntR-family transcriptional regulator (127 aa)    
Predicted Functional Partners:
R2601_00130
Cytochrome c heme-binding site-Penicillin amidase (325 aa)
 
          0.716
R2601_18133
Extracellular solute-binding protein, family 5 (515 aa)
   
          0.533
R2601_03008
Uncharacterized protein (346 aa)
   
          0.522
R2601_00830
Putative phosphotransferase (382 aa)
   
          0.508
R2601_25331
Drug/metabolite exporter family protein (306 aa)
   
          0.482
R2601_20651
Uncharacterized protein (479 aa)
   
          0.466
R2601_13304
Probable short-chain dehydrogenase (244 aa)
   
          0.433
R2601_18113
Acetylornithine deacetylase (427 aa)
   
          0.428
R2601_15130
Uncharacterized protein (434 aa)
   
          0.427
R2601_13504
Amidase (475 aa)
   
          0.418
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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