STRINGSTRING
R2601_00200 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00200" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00200Uncharacterized protein (463 aa)    
Predicted Functional Partners:
R2601_00220
Peptide ABC transporter, permease protein (298 aa)
 
   
  0.946
R2601_00225
Binding-protein-dependent transport systems inner membrane component (200 aa)
 
     
  0.945
R2601_00205
Possible gamma-glutamyltranspeptidase (521 aa)
 
   
  0.938
R2601_11831
Dihydropyrimidine dehydrogenase (434 aa)
   
 
  0.919
R2601_00210
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal (327 aa)
 
   
  0.903
R2601_00215
Peptide ABC transporter, ATP-binding protein (331 aa)
 
   
  0.894
R2601_13449
Urea amidohydrolase subunit beta (224 aa)
     
 
  0.846
R2601_16550
Possible polysaccharide deacetylase (471 aa)
       
    0.834
R2601_01315
Polysaccharide deacetylase family protein (463 aa)
       
    0.834
R2601_00255
FAD linked oxidase (946 aa)
   
  0.833
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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