STRINGSTRING
R2601_00415 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00415" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00415Uncharacterized protein (618 aa)    
Predicted Functional Partners:
R2601_00410
Flagellar basal body protein (249 aa)
              0.640
R2601_00405
Distal rod protein (261 aa)
              0.609
R2601_00395
Basal body L-ring protein ; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation (253 aa)
              0.608
R2601_00400
Flagella basal body P-ring formation protein FlgA ; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly (220 aa)
              0.605
R2601_00420
Flagellar hook protein FlgE (433 aa)
              0.547
R2601_00425
Flagellar hook-associated protein K (470 aa)
              0.488
R2601_00430
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (353 aa)
              0.467
R2601_00390
Uncharacterized protein (219 aa)
              0.445
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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