STRINGSTRING
R2601_00475 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00475" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00475Uncharacterized protein (274 aa)    
Predicted Functional Partners:
R2601_00470
FlbT protein (136 aa)
 
          0.967
R2601_00465
FlaF protein (145 aa)
 
          0.939
R2601_00460
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (309 aa)
 
          0.905
R2601_00455
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (330 aa)
 
          0.872
R2601_00430
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (353 aa)
 
          0.792
fliE
Flagellar hook-basal body complex protein FliE (109 aa)
 
          0.787
R2601_19270
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (432 aa)
 
          0.779
R2601_00425
Flagellar hook-associated protein K (470 aa)
 
          0.769
R2601_00285
Uncharacterized protein (274 aa)
   
          0.755
R2601_00305
Flagellar basal body rod protein FlgB ; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (133 aa)
 
          0.743
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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