STRINGSTRING
R2601_00520 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00520" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00520Uncharacterized protein (205 aa)    
Predicted Functional Partners:
fliM
Flagellar motor switch protein M (196 aa)
 
          0.967
R2601_00510
Flagellar motor switch protein FliM ; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation (313 aa)
 
          0.950
R2601_00515
Uncharacterized protein (123 aa)
              0.860
fliG
Flagellar motor switch protein G (354 aa)
 
          0.729
R2601_00400
Flagella basal body P-ring formation protein FlgA ; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly (220 aa)
   
          0.728
R2601_17599
Uncharacterized protein (225 aa)
   
          0.704
R2601_00430
Flagellin ; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (353 aa)
   
          0.699
fliF
Flagellar M-ring protein ; The M ring may be actively involved in energy transduction (535 aa)
 
          0.678
R2601_00275
Flagellar biosynthesis protein (251 aa)
 
          0.642
R2601_00305
Flagellar basal body rod protein FlgB ; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body (133 aa)
   
          0.630
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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