STRINGSTRING
R2601_00575 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00575" - Putative aldolase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00575Putative aldolase (229 aa)    
Predicted Functional Partners:
R2601_03208
Uncharacterized protein (378 aa)
 
 
    0.691
R2601_02998
Isomerase/lactonizing enzyme (382 aa)
 
 
    0.663
R2601_12825
Putative cycloisomerase (375 aa)
 
 
    0.662
R2601_12528
Mandelate racemase/muconate lactonizing enzyme family protein (329 aa)
 
 
    0.630
R2601_26201
6-phosphogluconate dehydrogenase domain protein (289 aa)
 
 
  0.597
R2601_26121
3-hydroxyisobutyrate dehydrogenase (290 aa)
 
 
  0.585
R2601_20751
Putative dihydrodipicolinate synthetase (293 aa)
   
 
    0.567
dapA
4-hydroxy-tetrahydrodipicolinate synthase ; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (286 aa)
   
 
    0.567
R2601_03218
Putative 5-dehydro-4-deoxyglucarate dehydratase (155 aa)
   
 
    0.567
R2601_02478
Dihydrodipicolinate synthase (295 aa)
   
 
    0.567
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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