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R2601_00580 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00580" - C4-dicarboxylate transport system permease small protein in Pelagibaca bermudensis
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00580C4-dicarboxylate transport system permease small protein (190 aa)    
Predicted Functional Partners:
R2601_00585
DctMQ fusion protein (C4-dicarboxylate transporter) (425 aa)
 
   
    0.990
R2601_00590
C4-dicarboxylate transport system (C4-dicarboxylate-binding protein) (321 aa)
 
          0.889
R2601_06033
TRAP dicarboxylate transporter, DctQ subunit, putative (155 aa)
   
   
    0.793
R2601_13319
Uncharacterized protein (169 aa)
   
   
    0.785
R2601_13314
Probable C4-dicarboxylate transport system, substrate-binding protein (333 aa)
 
          0.784
R2601_22222
TRAP-T family transporter, DctQ (4TMs) subunit (163 aa)
   
          0.727
R2601_20351
TRAP-type C4-dicarboxylate transport system (342 aa)
 
          0.716
R2601_13324
Uncharacterized protein (425 aa)
 
   
    0.710
R2601_06038
C4-dicarboxylate transport system C4-dicarboxylate-binding protein (322 aa)
 
          0.700
R2601_00875
Putative periplasmic binding protein (322 aa)
 
          0.676
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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