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R2601_00635 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00635" - SHIKIMATE 5-DEHYDROGENASE in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00635SHIKIMATE 5-DEHYDROGENASE (281 aa)    
Predicted Functional Partners:
aroK
Shikimate kinase ; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (192 aa)
  0.964
R2601_00655
High-affinity branched-chain amino acid transport system permease protein livh / high-affinity branched-chain amino acid (599 aa)
 
          0.923
R2601_00645
3-ketoacyl-(Acyl-carrier-protein) reductase (267 aa)
 
          0.914
aroC
5-enolpyruvylshikimate-3-phosphate phospholyase ; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (366 aa)
 
  0.908
aroQ
Type II DHQase ; Catalyzes a trans-dehydration via an enolate intermediate (147 aa)
   
 
  0.901
R2601_00650
ATP/GTP-binding site motif A (P-loop)-ABC transporter-AAA ATPase (234 aa)
     
    0.884
R2601_00640
Putative dehydrogenase, possibly aldehyde dehydrogenase protein (164 aa)
   
 
  0.870
aroB
3-dehydroquinate synthase (370 aa)
 
 
  0.865
R2601_00630
Glucose-methanol-choline oxidoreductase-GMC oxidoreductase (533 aa)
              0.863
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
 
  0.855
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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