STRINGSTRING
R2601_00660 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00660" - Branched-chain amino acid ABC transporter, permease protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00660Branched-chain amino acid ABC transporter, permease protein (295 aa)    
Predicted Functional Partners:
R2601_00655
High-affinity branched-chain amino acid transport system permease protein livh / high-affinity branched-chain amino acid (599 aa)
 
  0.999
R2601_00650
ATP/GTP-binding site motif A (P-loop)-ABC transporter-AAA ATPase (234 aa)
 
  0.994
R2601_20626
Branched amino acid ABC transporter (Permease) (291 aa)
 
  0.984
R2601_00665
Leu/Ile/Val-binding protein family-Extracellular ligand-binding receptor (398 aa)
 
 
  0.983
R2601_12710
Branched-chain amino acid ABC transporter, permease protein (358 aa)
 
  0.983
R2601_24819
Branched-chain amino acid ABC transporter, permease protein (429 aa)
 
 
  0.979
R2601_18483
Branched-chain amino acid ABC transporter, permease protein (400 aa)
 
  0.978
R2601_10714
ABC transporter permease protein (326 aa)
 
  0.977
R2601_21907
Branched-chain amino acid ABC transporter, ATP-binding protein (233 aa)
 
  0.968
R2601_24829
Branched-chain amino acid ABC transporter, ATP-binding protein (274 aa)
 
  0.968
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (9%) [HD]