STRINGSTRING
R2601_00670 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00670" - Uncharacterized protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00670Uncharacterized protein (576 aa)    
Predicted Functional Partners:
ilvC
Alpha-keto-beta-hydroxylacyl reductoisomerase (340 aa)
 
 
  0.996
ilvA
Threonine deaminase ; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA (414 aa)
 
  0.988
R2601_26746
Probable threonine dehydratase protein (338 aa)
 
  0.986
R2601_11034
Threonine dehydratase (323 aa)
 
  0.985
R2601_01360
Pyridoxal-phosphate dependent enzyme (321 aa)
   
  0.982
R2601_13699
Threonine dehydratase (305 aa)
 
  0.977
ilvD
Dihydroxy-acid dehydratase (609 aa)
 
 
  0.947
R2601_12990
Glutamate synthase, large subunit (1537 aa)
   
 
  0.947
R2601_01718
Dihydroxy-acid dehydratase (577 aa)
 
 
  0.946
R2601_00680
Sorbitol dehydrogenase (351 aa)
 
 
  0.936
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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