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R2601_00750 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00750" - Tetratricopeptide TPR_4 in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00750Tetratricopeptide TPR_4 (525 aa)    
Predicted Functional Partners:
R2601_00755
Von Willebrand factor type A domain protein (335 aa)
 
        0.979
R2601_00765
Uncharacterized protein (325 aa)
 
        0.974
R2601_00745
Uncharacterized protein (422 aa)
 
          0.973
R2601_00770
ATPase associated with various cellular activities, AAA_3 (334 aa)
 
        0.969
R2601_00775
Nonspecific acid phosphatase (323 aa)
 
          0.942
R2601_00780
Arylsulfatase (526 aa)
 
          0.872
R2601_00760
Uncharacterized protein (166 aa)
              0.867
R2601_00740
Uncharacterized protein (668 aa)
 
          0.795
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (521 aa)
       
    0.769
R2601_13015
Arylsulfatase (347 aa)
 
          0.698
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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