STRINGSTRING
R2601_00770 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00770" - ATPase associated with various cellular activities, AAA_3 in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00770ATPase associated with various cellular activities, AAA_3 (334 aa)    
Predicted Functional Partners:
R2601_00765
Uncharacterized protein (325 aa)
 
   
  0.979
R2601_00755
Von Willebrand factor type A domain protein (335 aa)
 
        0.977
R2601_00750
Tetratricopeptide TPR_4 (525 aa)
 
        0.969
R2601_00745
Uncharacterized protein (422 aa)
 
          0.932
R2601_21957
Xanthine dehydrogenase family protein, small/large subunits (905 aa)
       
  0.869
R2601_00760
Uncharacterized protein (166 aa)
              0.844
R2601_00775
Nonspecific acid phosphatase (323 aa)
              0.838
R2601_23670
Cobalt chelatase, pCobT subunit (625 aa)
   
 
  0.731
R2601_13634
Uncharacterized protein (291 aa)
 
     
  0.644
R2601_26381
VWA domain containing CoxE-like family protein (416 aa)
       
    0.643
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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