STRINGSTRING
R2601_00830 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00830" - Putative phosphotransferase in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_00830Putative phosphotransferase (382 aa)    
Predicted Functional Partners:
R2601_00835
Putative aminotransferase (427 aa)
 
  0.994
R2601_04918
Pyridoxal phosphate aminotransferase (436 aa)
 
  0.957
R2601_00840
Bacterial regulatory proteins, AsnC family-Bacterial regulatory protein, GntR family (235 aa)
              0.723
R2601_15447
DNA polymerase I (935 aa)
   
        0.563
R2601_07861
Diaminobutyrate--2-oxoglutarate aminotransferase (424 aa)
 
 
  0.532
R2601_00125
Putative GntR-family transcriptional regulator (127 aa)
   
          0.508
R2601_25176
Uncharacterized protein (353 aa)
   
   
    0.483
R2601_12523
Aminotransferase class IV , putative D-alanine aminotransferase (287 aa)
   
   
    0.482
R2601_17719
Homoserine dehydrogenase (428 aa)
   
 
  0.468
R2601_20981
Inositol monophosphatase family protein (269 aa)
   
        0.461
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
Server load: low (10%) [HD]