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R2601_00910 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_00910" - Ribose-5-phosphate isomerase B in Pelagibaca bermudensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
R2601_00910Ribose-5-phosphate isomerase B (153 aa)    
Predicted Functional Partners:
R2601_00900
Transketolase ; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (668 aa)
   
 
  0.995
R2601_00905
Triose-phosphate isomerase ; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (261 aa)
 
 
  0.989
R2601_24544
Transketolase (672 aa)
   
 
  0.988
R2601_17409
Transketolase ; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (661 aa)
   
 
  0.988
R2601_00855
Putative transketolase alpha subunit protein (282 aa)
       
  0.983
R2601_00850
Putative transketolase beta subunit protein (344 aa)
       
  0.983
R2601_17414
Phosphoribulokinase (290 aa)
         
    0.977
R2601_27318
Transketolase, putative (798 aa)
         
    0.955
R2601_18268
Uracil phosphoribosyltransferase ; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (165 aa)
   
 
  0.932
glyA
Serine hydroxymethyltransferase ; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (431 aa)
   
      0.928
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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