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uxuA protein (Pelagibaca bermudensis) - STRING interaction network
"uxuA" - D-mannonate hydro-lyase in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAD-mannonate hydro-lyase ; Catalyzes the dehydration of D-mannonate (404 aa)    
Predicted Functional Partners:
R2601_00985
D-mannonate oxidoreductase (486 aa)
 
 
  0.999
R2601_22681
2-dehydro-3-deoxygluconokinase (308 aa)
 
   
  0.995
R2601_22247
Putative altronate dehydrogenase (368 aa)
 
 
  0.990
R2601_26546
Mannitol dehydrogenase (497 aa)
 
 
  0.967
R2601_22252
Altronate hydrolase (498 aa)
 
   
  0.941
R2601_03288
2-deoxy-D-gluconate 3-dehydrogenase (247 aa)
 
   
  0.872
R2601_00995
Transcriptional regulator, GntR family protein (232 aa)
 
          0.871
kduI
DKI isomerase ; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate (375 aa)
 
     
  0.815
R2601_01000
TRAP dicarboxylate transporter, DctP subunit, putative (325 aa)
 
          0.810
R2601_16932
Putative Fructokinase (299 aa)
       
  0.793
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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